OpenOntologyRepository_Architecture: Ideas, Candidates, Proposals and References From BioPortal

Ideas, Candidates, Proposals

• As presented by Natasha Noy on 2010.09.17
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References

• BioPortal - http://bioportal.bioontology.org
• http://www.bioontology.org/wiki/index.php/NCBO-OOR_Development
• http://www.bioontology.org/wiki/index.php/NCBO_Developer_Communications
• ...

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Update: BioPortal architecture (reversed engineered from Build3253, circa Nov-2011)

ref. OOR/ConferenceCall_2012_01_31

The EA HTML report can be found at http://ontolog.cim3.net/file/work/OOR/oor-dev/BioPortal_Build3253_Nov2011_EA_Model--ToddSchneider_20120130/BioPortal_Build3253_EA_HTML_Report/index.html

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High Level BioPortal Architecture Diagram

ref. http://ontolog.cim3.net/forum/oor-forum/2010-08/msg00005.html

[ Full-size diagram ]

NCBO BioPortal Core - UML Model

The UML model for the National Center for Biomedical Ontology (NCBO) BioPortal Core code in HTML can be found at http://ontolog.cim3.net/file/work/OOR/oor-dev/BioPortal_3Mar2009_UML-Model_ToddSchneider_20090614/index.html. This model was reversed engineered from NCBO BioPortal code downloaded on or about 3 March 2009.

The next two diagrams provide a quick overview

BioPortal Core - UML Core Packages

• NCBO BioPortal Core Package Diagram

• NCBO BioPortal - UML Core Packages Detail